Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835205.1_cds_XP_016505864.1_19154
CDS Infomation

[gene=LOC107823686] [db_xref=GeneID:107823686] [protein=DNAJ protein JJJ1 homolog] [protein_id=XP_016505864.1] [location=join(97091..97573,98072..99352,99598..99656,99758..99815)] [gbkey=CDS]
Sequence

ATGGCGTCGTCGGAGAAAAGATGCCTCTACGAGGTCCTAGGCGTGAACCGTGACTGCACC
CCCGACGAGATCCGGTCCGCCTACAGGCGGCTCGCTCTGCAACGCCACCCTGACAAGCTA
GTCAAATCCGGCGTACCGGAATCCGAAGCCACAGCTGCGTTTCAGGAGCTCGTCAACGCC
TACGAAGTCCTGTCCGACGCGCGGGAGCGCGCTTGGTACGACTCGCACCGCTCTCAGATA
CTCTTCTCGTCCAATTCCGCTCCAACCAATTCGTCTAATTCTGGTTCTGTCCCCGACTTA
TTCTCCTTCTTTTCCAATTCAGTTTATTCTGGTTACTCCGATAAAGGCAAGGGCTTTTAC
AAAGTCTATGGTGATCTCTTCGAGAAAATCTACCAAAACGATTTGAATTTCGCGAGGACG
TTAGGTATAGGTTTTCCCAAAGAAGCTCCTCTCATGGGAAATTTGGACAGTCCTTATGCT
CAGGTGACAGCATTCTATAACTATTGGTTAGGATTTGTTACTGTGATGGATTTTTGTTGG
GTAGATCAGTATGACGTGATGGCGGGACCCAATAGAAAGTCAAGGAGGGTGATGGAGGAG
GAGAACAAGAAGCTGAGGAAAAAGGCACGAAGGGAATACAATGAGACTGTTAGAGGATTG
GCAGAGTTTGTGAAAAAGAGAGATAAGAGGGTGATTGACATGCAGATGAAGAGGAATGAG
GAGATGGAGAGGAAGAGGGAAAAGGAACGGGAGAGAAAGGAGGAGTTAGAGAGAGAGAAG
GTTGAGAAAGCAAAGAAATACGTGGAGCCTGATTGGGCAAAGGCGGAGGAGTTGGAAAAT
GAAGAAATCGAGGAGGAATGGGATGAGGATGGAAAAAAGAAGGCAGATGAGAATGAATTG
TACTGTGTGGTGTGTTCGAAGAAGTTTAAGAGCGAGAAACAGTGGAAAAATCACGAGCAG
TCCAAGAAGCATAAGGAGAAGGTGGCAGCTTTGAGAGAAGCTTTTGATGATGAAGATTGT
GAATACGAAGGGTTGGTGGAGGATGGGGTAAGTGAGGAGCAAAAGGTAGCTGATGGTGAT
AGAACATCTGATTTATCTGCGGATGATGGGGTGGATGAGTTAGCAGAGCAATTTGAAGGT
AGTACGCGAATTCAAGAAGATGAACGTGAGGATGATGAGGTTCAAAGCAGCAATGAAGAT
GAGACCACATCACAGGGATTAGATGATGGGTTAAATTATCGAAGTGGCAGTGATTCAAAG
GTAGTAGCCGATGAACTTGGATTAGATGATGATGAAGCAAGTGTACTTGAAGCTATGGTA
TCTGGCCGCAAAAGTAGGAAGAATGCAGGTCCAGCTGGCAGTCGTCAAACCTCAGCAAAG
AATGTAAAGGGTGAAACCAGTAACGAGGAAATGGACTTCATGGAATATAATAATCTTAGA
AGTACTAGGAGAAATAGGGGTGGCCGGAGACAAAGAAACAGGAGACCACAAGAAGAAGAA
GACGAAGAAGGTGAAGGAGGAGATGTTAGATCTTATGCGACTAAAGTTGCTGTAATTACT
GAGTTAGATAGTGCTTATAATGAGAGCTCAGCTTTCCAGGAGCCGTCATCAGATTCTCCA
GCAGAAACTGCTAATGATCACAAAGGAAGTGACCTTTCGCGAAATAGCGAAAAAGTTTCA
AGCCAAGGTATGGACAAGAAAACTACCGCAAAGAAGGAGAAGAATACCAAATCAAAAGAT
GCAACCAAAGGAAGGAAACAGAAGGGAACATCGAAATTTTCTAGCAACTCGTGCGAGACA
TGTGGGGAGGAATTTGATACAAGGAATCAATTACATAAGCATCTAGGAGCGACAGGGCAT
GCCAAACTAAAGTCTCGGTGA

Peptide Sequence

PEP ID

XP_016505864.1
PEP Infomation

PREDICTED: DNAJ protein JJJ1 homolog [Nicotiana tabacum]
Sequence

MASSEKRCLYEVLGVNRDCTPDEIRSAYRRLALQRHPDKLVKSGVPESEATAAFQELVNA
YEVLSDARERAWYDSHRSQILFSSNSAPTNSSNSGSVPDLFSFFSNSVYSGYSDKGKGFY
KVYGDLFEKIYQNDLNFARTLGIGFPKEAPLMGNLDSPYAQVTAFYNYWLGFVTVMDFCW
VDQYDVMAGPNRKSRRVMEEENKKLRKKARREYNETVRGLAEFVKKRDKRVIDMQMKRNE
EMERKREKERERKEELEREKVEKAKKYVEPDWAKAEELENEEIEEEWDEDGKKKADENEL
YCVVCSKKFKSEKQWKNHEQSKKHKEKVAALREAFDDEDCEYEGLVEDGVSEEQKVADGD
RTSDLSADDGVDELAEQFEGSTRIQEDEREDDEVQSSNEDETTSQGLDDGLNYRSGSDSK
VVADELGLDDDEASVLEAMVSGRKSRKNAGPAGSRQTSAKNVKGETSNEEMDFMEYNNLR
STRRNRGGRRQRNRRPQEEEDEEGEGGDVRSYATKVAVITELDSAYNESSAFQEPSSDSP
AETANDHKGSDLSRNSEKVSSQGMDKKTTAKKEKNTKSKDATKGRKQKGTSKFSSNSCET
CGEEFDTRNQLHKHLGATGHAKLKSR

Transcript Sequence

Gene sequence data has not been registered.